- a -

• AllocateMo() : ldndc::PhysiologyPNET
• AllocateYr() : ldndc::PhysiologyPNET

- b -

• balance_check() : ldndc::WatercycleDNDC

- c -

• CalcIceContent() : ldndc::WatercycleDNDC
• CalcInterception() : ldndc::WatercycleDNDC
• CalcIrrigation() : ldndc::WatercycleDNDC
• CalcPotEvapoTranspiration() : ldndc::WatercycleDNDC
• CalcRaining() : ldndc::WatercycleDNDC
• CalcSnowEvaporation() : ldndc::WatercycleDNDC
• CalcSoilEvapoPercolation() : ldndc::WatercycleDNDC
• CalcSurfaceFlux() : ldndc::WatercycleDNDC
• CalcSurfaceWaterEvaporation() : ldndc::WatercycleDNDC
• CalcTranspiration() : ldndc::WatercycleDNDC
• CalcTranspirationCouvreur() : ldndc::WatercycleDNDC

- e -

• EcHyBalanceCheck() : ldndc::EcHy
• EcHyBypassFlow() : ldndc::EcHy
• EcHyCalculateLeafWaterDistribution() : ldndc::EcHy
• EcHyCapillaryRise() : ldndc::EcHy
• EcHyEvapotranspiration() : ldndc::EcHy
• EcHyFlood() : ldndc::EcHy
• EcHyGetAvailableWaterEvaporation() : ldndc::EcHy
• EcHyGetAvailableWaterTranspiration() : ldndc::EcHy
• EcHyGetInterceptionCapacity() : ldndc::EcHy
• EcHyGetMinimumWater() : ldndc::EcHy
• EcHyGetRootLimitation() : ldndc::EcHy
• EcHyGetWiltingPoint() : ldndc::EcHy
• EcHyGroundwater() : ldndc::EcHy
• EcHyIntegration() : ldndc::EcHy
• EcHyIrrigation() : ldndc::EcHy
• EcHyPercolation() : ldndc::EcHy
• EcHyPotentialEvapotranspiration() : ldndc::EcHy
• EcHyreset() : ldndc::EcHy
• EcHySnowIce() : ldndc::EcHy
• EcHySoilWaterChange() : ldndc::EcHy
• EcHyStepExit() : ldndc::EcHy
• EcHyStepInit() : ldndc::EcHy
• event_flood() : ldndc::WatercycleDNDC
• event_irrigate() : ldndc::WatercycleDNDC

- g -

• get_fsl() : ldndc::WatercycleDNDC
• get_impedance_factor() : ldndc::WatercycleDNDC
• get_leaf_water() : ldndc::WatercycleDNDC
• get_na_max_pnet() : ldndc::PhysiologyPNET
• get_time_step_duration() : ldndc::WatercycleDNDC

- m -

• MeTrX_algae_dynamics() : ldndc::SoilChemistryMeTrX
• MeTrX_anaerobic_volume() : ldndc::SoilChemistryMeTrX
• MeTrX_ch4_oxidation() : ldndc::SoilChemistryMeTrX
• MeTrX_ch4_production() : ldndc::SoilChemistryMeTrX
• MeTrX_check_for_negative_value() : ldndc::SoilChemistryMeTrX
• MeTrX_chemodenitrification() : ldndc::SoilChemistryMeTrX
• MeTrX_clay_nh4_equilibrium() : ldndc::SoilChemistryMeTrX
• MeTrX_denitrification() : ldndc::SoilChemistryMeTrX
• MeTrX_dissolution() : ldndc::SoilChemistryMeTrX
• MeTrX_dissolution_soil() : ldndc::SoilChemistryMeTrX
• MeTrX_ebullition() : ldndc::SoilChemistryMeTrX
• MeTrX_fermentation() : ldndc::SoilChemistryMeTrX
• MeTrX_fertilize() : ldndc::SoilChemistryMeTrX
• MeTrX_fragmentation() : ldndc::SoilChemistryMeTrX
• MeTrX_freeze_thaw() : ldndc::SoilChemistryMeTrX
• MeTrX_gas_diffusion() : ldndc::SoilChemistryMeTrX
• MeTrX_get_c_tot() : ldndc::SoilChemistryMeTrX
• MeTrX_get_fact_m_denit() : ldndc::SoilChemistryMeTrX
• MeTrX_get_fact_t_denit() : ldndc::SoilChemistryMeTrX
• MeTrX_get_fact_tm_decomp() : ldndc::SoilChemistryMeTrX
• MeTrX_get_fact_tm_denit() : ldndc::SoilChemistryMeTrX
• MeTrX_get_k_mm_x_sl() : ldndc::SoilChemistryMeTrX
• MeTrX_get_n_tot() : ldndc::SoilChemistryMeTrX
• MeTrX_get_ph_sl() : ldndc::SoilChemistryMeTrX
• MeTrX_get_ph_wl() : ldndc::SoilChemistryMeTrX
• MeTrX_groundwater_access() : ldndc::SoilChemistryMeTrX
• MeTrX_iron_oxidation() : ldndc::SoilChemistryMeTrX
• MeTrX_iron_reduction() : ldndc::SoilChemistryMeTrX
• MeTrX_leaching() : ldndc::SoilChemistryMeTrX
• MeTrX_liq_diffusion() : ldndc::SoilChemistryMeTrX
• MeTrX_litter_distribution() : ldndc::SoilChemistryMeTrX
• MeTrX_manure() : ldndc::SoilChemistryMeTrX
• MeTrX_metabolism() : ldndc::SoilChemistryMeTrX
• MeTrX_microbial_dynamics() : ldndc::SoilChemistryMeTrX
• MeTrX_nh3_nh4_equilibrium() : ldndc::SoilChemistryMeTrX
• MeTrX_nitrification() : ldndc::SoilChemistryMeTrX
• MeTrX_nitrogen_fertilizer_release() : ldndc::SoilChemistryMeTrX
• MeTrX_pertubation() : ldndc::SoilChemistryMeTrX
• MeTrX_pH_calculation() : ldndc::SoilChemistryMeTrX
• MeTrX_physics() : ldndc::SoilChemistryMeTrX
• MeTrX_plant_respiration() : ldndc::SoilChemistryMeTrX
• MeTrX_radon_source_sink() : ldndc::SoilChemistryMeTrX
• MeTrX_receive_state() : ldndc::SoilChemistryMeTrX
• MeTrX_reset() : ldndc::SoilChemistryMeTrX
• MeTrX_reset_daily() : ldndc::SoilChemistryMeTrX
• MeTrX_reset_subdaily() : ldndc::SoilChemistryMeTrX
• MeTrX_send_state() : ldndc::SoilChemistryMeTrX
• MeTrX_soil_organic_matter_turnover() : ldndc::SoilChemistryMeTrX
• MeTrX_spinup() : ldndc::SoilChemistryMeTrX
• MeTrX_till() : ldndc::SoilChemistryMeTrX
• MeTrX_update() : ldndc::SoilChemistryMeTrX
• MeTrX_update_soil_discretization() : ldndc::SoilChemistryMeTrX
• MeTrX_urea_hydrolysis() : ldndc::SoilChemistryMeTrX
• MeTrX_write_output() : ldndc::SoilChemistryMeTrX
• MeTrX_write_output_daily() : ldndc::SoilChemistryMeTrX
• MeTrX_write_output_fluxes() : ldndc::SoilChemistryMeTrX
• MeTrX_write_output_layer_daily() : ldndc::SoilChemistryMeTrX
• MeTrX_write_output_layer_yearly() : ldndc::SoilChemistryMeTrX
• MeTrX_write_output_pools() : ldndc::SoilChemistryMeTrX
• MeTrX_write_output_subdaily() : ldndc::SoilChemistryMeTrX
• MeTrX_write_output_yearly() : ldndc::SoilChemistryMeTrX
• MeTrX_write_rates() : ldndc::SoilChemistryMeTrX

- n -

• N_uptake() : ldndc::PhysiologyPNET

- p -

• Phenology() : ldndc::PhysiologyPNET
• Photosyn() : ldndc::PhysiologyPNET
• PlaMox_allocation_grass() : ldndc::PhysiologyPlaMox
• PlaMox_bud_burst() : ldndc::PhysiologyPlaMox
• PlaMox_drought() : ldndc::PhysiologyPlaMox
• PlaMox_event_harvest() : ldndc::PhysiologyPlaMox
• PlaMox_event_plant() : ldndc::PhysiologyPlaMox
• PlaMox_exsudation() : ldndc::PhysiologyPlaMox
• PlaMox_get_age_factor() : ldndc::PhysiologyPlaMox
• PlaMox_get_biomass_induced_downregulation() : ldndc::PhysiologyPlaMox
• PlaMox_get_foliage_nitrogen_concentration() : ldndc::PhysiologyPlaMox
• PlaMox_get_frost_factor() : ldndc::PhysiologyPlaMox
• PlaMox_get_heat_factor() : ldndc::PhysiologyPlaMox
• PlaMox_get_hypoxia_factor() : ldndc::PhysiologyPlaMox
• PlaMox_get_nitrogen_deficiency() : ldndc::PhysiologyPlaMox
• PlaMox_growing_degree_days() : ldndc::PhysiologyPlaMox
• PlaMox_heat_stress_limitation() : ldndc::PhysiologyPlaMox
• PlaMox_management() : ldndc::PhysiologyPlaMox
• PlaMox_n_opt() : ldndc::PhysiologyPlaMox
• PlaMox_nitrogen_fixation() : ldndc::PhysiologyPlaMox
• PlaMox_nitrogen_uptake() : ldndc::PhysiologyPlaMox
• PlaMox_photosynthesis() : ldndc::PhysiologyPlaMox
• PlaMox_redistribution() : ldndc::PhysiologyPlaMox
• PlaMox_respiration() : ldndc::PhysiologyPlaMox
• PlaMox_senescence() : ldndc::PhysiologyPlaMox
• PlaMox_step_init() : ldndc::PhysiologyPlaMox
• PlaMox_step_resize() : ldndc::PhysiologyPlaMox
• PlaMox_transpiration() : ldndc::PhysiologyPlaMox
• PlaMox_update_foliage_structure() : ldndc::PhysiologyPlaMox
• PlaMox_update_ground_cover() : ldndc::PhysiologyPlaMox
• PlaMox_update_height() : ldndc::PhysiologyPlaMox
• PlaMox_update_nitrogen_concentrations() : ldndc::PhysiologyPlaMox
• PlaMox_update_root_structure() : ldndc::PhysiologyPlaMox
• PlaMox_update_specific_leaf_area() : ldndc::PhysiologyPlaMox
• PlaMox_vernalization() : ldndc::PhysiologyPlaMox
• PSIM_AgriculturalManagement() : ldndc::PhysiologyGrowthPSIM
• PSIM_BiomassUpdate() : ldndc::PhysiologyGrowthPSIM
• PSIM_HydraulicConductance() : ldndc::PhysiologyGrowthPSIM
• PSIM_NitrogenFixation() : ldndc::PhysiologyGrowthPSIM
• PSIM_Photosynthesis() : ldndc::PhysiologyGrowthPSIM
• PSIM_PhotosynthesisRates() : ldndc::PhysiologyGrowthPSIM
• PSIM_PlantingEvent() : ldndc::PhysiologyGrowthPSIM
• PSIM_Potentialtranspiration() : ldndc::PhysiologyGrowthPSIM
• PSIM_ResizeVegetationVectors() : ldndc::PhysiologyGrowthPSIM
• PSIM_StepInit() : ldndc::PhysiologyGrowthPSIM

- r -

• rainfall_intensity() : ldndc::WatercycleDNDC

- s -

• sleep() : ldndc::PhysiologyPNET
• SoilWaterEvaporation() : ldndc::WatercycleDNDC
• solve() : ldndc::EcHy , ldndc::PhysiologyPNET , ldndc::SoilChemistryMeTrX , ldndc::WatercycleDNDC

- t -

• TransformPhysiology() : ldndc::PhysiologyPNET

- u -

• Update() : ldndc::PhysiologyPNET
• update_nitrogen_concentration() : ldndc::PhysiologyPNET

- w -

• WatercycleDNDC_preferential_flow() : ldndc::WatercycleDNDC
• WaterFlowAboveFieldCapacity() : ldndc::WatercycleDNDC
• WaterFlowCapillaryRise() : ldndc::WatercycleDNDC

- y -

• YearlyReset() : ldndc::PhysiologyPNET

- ~ -

• ~PhysiologyPlaMox() : ldndc::PhysiologyPlaMox